Alan Moses

Computational Biology Laboratory

Computational Biology Laboratory

Computational Biology Laboratory

Research
Evolution & Dynamics
of Regulatory Networks
Research
Molecular Evolution
Of Disordered Regions
Research
Genomics & Proteomics
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MOSES LAB

We are a group of computational, systems, and evolutionary biologists broadly interested in molecular evolution, population genetics, and the dynamics and evolution of gene regulatory networks. Our approach is both theoretical and experimental and we try to tackle the big questions in these fields by building on the latest advances in computer science and systems biology.

LATEST LAB NEWS

 

Dec 2022Congratulations to Dr. Nirvana for defending her PhD!
Sept 2022Congratulations to Aqsa for finishing her MSc!
June 2022Wow: contrastive learning using evolution as the training signal. Check out Alex's paper.
May 2022Wishing best of luck to Iva who is starting her group in Graz

CRZ1 Pulse - From Ian's research project

RECENT PUBLICATIONS

Duncan AG, Mitchell JA, Moses AM. Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation.Bioinformatics. Published online April 8, 2024.
Bioinformatics Link PubMed Abstract Article
Deep Learning Phylogenetics Data Augmentation
Duffy EE, Finander B, Choi G, Carter AC, Pritisanac I, Alam A, Luria V, Karger A, Phu W, Sherman MA, Assad EG, Pajarillo N, Khitun A, Crouch EE, Ganesh S, Chen J, Berger B, Sestan N, O'Donnell-Luria A, Huang EJ, Griffith EC, Forman-Kay JD, Moses AM, Kalish BT, Greenberg ME. Developmental dynamics of RNA translation in the human brain. Nat Neurosci. Oct;25(10):1353-1365.
Nature Neuroscience Link PDF Mirror PubMed Abstract Article
Proteomics Intrinsically Disordered Regions Proteomics Brain
Nursimulu N, Moses AM, Parkinson J. Architect: A tool for aiding the reconstruction of high-quality metabolic models through improved enzyme annotation. PLoS Comput Biol. Sep 8;18(9)
PLoS Comp. Bio. Link PDF Mirror PubMed Abstract Article
Proteomics Metabolic Networks Computational Modelling Bioinformatics

CONTACT US

The Moses Lab is affiliated with the departments of Cell and Systems Biology, Computer Science, and Ecology and Evolutionary Biology at the University of Toronto. Our lab is in the Ramsay-Wright Labs (25 Harbord St.), located on the southwest side of the St. George Campus. To contact Alan or other lab members, please visit the People page.